{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "## Finite Difference Method for Schroedinger Equation\n", "### Harmonic Oscillator\n", "\n", "Calculate wavefunctions and energies for given potential $u(x)$.\n", "\n", "Use finite-difference method to turn this into an eigenvalue problem.\n", "See ~/research/notes/finiteDifference/finiteDifference_notes.pdf, \n", "along with Mathematica notebooks that do similar calculations.\n", "\n", "Schrödinger equation:\n", "\n", "$$\n", "-\\frac{d^2\\psi}{dx^2} - \\frac{2m}{\\hbar^2}\\, \\frac{1}{2}kx^2\\psi \n", " = \\frac{2m}{\\hbar^2} E\\psi\n", "$$\n", "\n", "Define a dimensionless length parameter\n", "\n", "$$\n", "x^\\prime \\equiv \\frac{x}{a},\n", "$$\n", "\n", "where $a$ will be determined shortly. Rewriting the Schrödinger\n", "equation gives\n", "\n", "$$\n", "-\\frac{d^2\\psi}{d{x^\\prime}^2} + \\left(\\frac{kma^4}{\\hbar^2}\\right)\n", " \\, {x^\\prime}^2\\psi \n", " = \\frac{2ma^2}{\\hbar^2} E\\psi\n", "$$\n", "Now choose $a$ so that the factor in parentheses is unity:\n", "$$\n", "a^4 = \\frac{\\hbar^2}{km} = \\frac{\\hbar^2}{m^2\\omega^2}\n", "\\quad\\longrightarrow \\quad a^2 = \\frac{\\hbar}{m\\omega}.\n", "$$\n", "\n", "The Schrödinger equation can now be written as\n", "\n", "$$\n", "-\\frac{d^2\\psi}{d{x^\\prime}^2} + {x^\\prime}^2 \\psi\n", " = \\frac{E}{\\hbar\\omega} \\psi\n", "$$\n", "\n", "which sugggests working with a dimensionless energy\n", "\n", "$$ \n", "E^\\prime \\equiv \\frac{2E}{\\hbar\\omega}\n", "$$\n", "\n", "giving a dimensionless version of the Schrödinger equation\n", "\n", "$$\n", "-\\frac{d^2\\psi}{d{x^\\prime}^2} + {x^\\prime}^2 \\psi\n", " = E^\\prime \\psi.\n", "$$\n", "\n", "This is good for computational work because there are no messy \n", "physical constants to worry about.\n", "\n", "I use a finite-difference method to turn the solving of Schrödinger's into an eigenvalue problem. Briefly, after discretizing $x^\\prime$, (i.e., $^\\prime_j = \n", "x_0 + j\\Delta$), an approximate version of Schrödinger's equation can be written as \n", "\n", "$$\n", "\\frac{-\\psi_{j+1} + 2\\psi_j - \\psi_{j-1}}{\\Delta^2} + x_j^2\\psi_j = \n", " E^\\prime \\psi_j.\n", "$$\n", "\n", "This is an eigenvalue problem:\n", "\n", "$$ \n", "H_{ji}\\psi_i = E^\\prime \\psi_j,\n", "$$\n", "\n", "where \n", "\n", "$$\n", "H_{ji} = \\left\\{\\begin{array}{cl}\n", " \\frac{2}{\\Delta^2} + x_i^2 & \\mbox{for $i=j$} \\\\\n", " -\\frac{1}{\\Delta^2} & \\mbox{for $i = j\\pm 1$}\\\\\n", " 0 & \\mbox{otherwise}\n", " \\end{array}\\right.\n", "$$\n", "Used as supplementary exercise in PHYS 212E, Spring 2016\n", "\n", "Marty Ligare" ] }, { "cell_type": "code", "execution_count": 1, "metadata": {}, "outputs": [], "source": [ "import numpy as np\n", "from scipy import linalg\n", "\n", "import matplotlib as mpl\n", "import matplotlib.pyplot as plt" ] }, { "cell_type": "code", "execution_count": 2, "metadata": {}, "outputs": [], "source": [ "# Following is an Ipython magic command that puts figures in the notebook.\n", "%matplotlib notebook\n", "\n", "# M.L. modification of matplotlib defaults\n", "# Changes can also be put in matplotlibrc file, \n", "# or effected using mpl.rcParams[]\n", "mpl.style.use('classic')\n", "plt.rc('figure', figsize = (6, 4.5)) # Reduces overall size of figures\n", "plt.rc('axes', labelsize=16, titlesize=14)\n", "plt.rc('figure', autolayout = True) # Adjusts supblot parameters for new size" ] }, { "cell_type": "code", "execution_count": 3, "metadata": {}, "outputs": [], "source": [ "def u(x): # Potential energy function\n", " return x**2" ] }, { "cell_type": "code", "execution_count": 4, "metadata": {}, "outputs": [], "source": [ "n = 4000 # Number of intervals (J=1 in my notes)\n", "dim = n - 1 # Number of internal points\n", "xl = -20. # xl is set far enough to left of well such that \\psi=0\n", "xr = 20. # xr is set far enough to right of well such that \\psi=0\n", " # For HO, results should be good up to energies of \n", " # about (xr/2)**2 in units of \\hbar/\\omega\n", "\n", "delta = (xr-xl)/n\n", " \n", "x = np.linspace(xl+delta,xr-delta,dim)\n", "\n", "#Fill Hamiltonian\n", "\n", "h = np.zeros((dim,dim),float)\n", "for i in range(len(h)-1):\n", " h[i,i+1] = h[i+1,i] = -1/delta**2 \n", "\n", "for i in range(len(h)):\n", " h[i,i] = 2./delta**2 + u(x[i]) \n", "\n", "# Calculate eigenvalues and eigenvectors\n", "vals, vecs = linalg.eigh(h) #Note: eigenvectors are in columns of vecs" ] }, { "cell_type": "code", "execution_count": 5, "metadata": {}, "outputs": [ { "data": { "application/javascript": [ "/* Put everything inside the global mpl namespace */\n", "window.mpl = {};\n", "\n", "\n", "mpl.get_websocket_type = function() {\n", " if (typeof(WebSocket) !== 'undefined') {\n", " return WebSocket;\n", " } else if (typeof(MozWebSocket) !== 'undefined') {\n", " return MozWebSocket;\n", " } else {\n", " alert('Your browser does not have WebSocket support. ' +\n", " 'Please try Chrome, Safari or Firefox ≥ 6. ' +\n", " 'Firefox 4 and 5 are also supported but you ' +\n", " 'have to enable WebSockets in about:config.');\n", " };\n", "}\n", "\n", "mpl.figure = function(figure_id, websocket, ondownload, parent_element) {\n", " this.id = figure_id;\n", "\n", " this.ws = websocket;\n", "\n", " this.supports_binary = (this.ws.binaryType != undefined);\n", "\n", " if (!this.supports_binary) {\n", " var warnings = document.getElementById(\"mpl-warnings\");\n", " if (warnings) {\n", " warnings.style.display = 'block';\n", " warnings.textContent = (\n", " \"This browser does not support binary websocket messages. \" +\n", " \"Performance may be slow.\");\n", " }\n", " }\n", "\n", " this.imageObj = new Image();\n", "\n", " this.context = undefined;\n", " this.message = undefined;\n", " this.canvas = undefined;\n", " this.rubberband_canvas = undefined;\n", " this.rubberband_context = undefined;\n", " this.format_dropdown = undefined;\n", "\n", " this.image_mode = 'full';\n", "\n", " this.root = $('
');\n", " this._root_extra_style(this.root)\n", " this.root.attr('style', 'display: inline-block');\n", "\n", " $(parent_element).append(this.root);\n", "\n", " this._init_header(this);\n", " this._init_canvas(this);\n", " this._init_toolbar(this);\n", "\n", " var fig = this;\n", "\n", " this.waiting = false;\n", "\n", " this.ws.onopen = function () {\n", " fig.send_message(\"supports_binary\", {value: fig.supports_binary});\n", " fig.send_message(\"send_image_mode\", {});\n", " if (mpl.ratio != 1) {\n", " fig.send_message(\"set_dpi_ratio\", {'dpi_ratio': mpl.ratio});\n", " }\n", " fig.send_message(\"refresh\", {});\n", " }\n", "\n", " this.imageObj.onload = function() {\n", " if (fig.image_mode == 'full') {\n", " // Full images could contain transparency (where diff images\n", " // almost always do), so we need to clear the canvas so that\n", " // there is no ghosting.\n", " fig.context.clearRect(0, 0, fig.canvas.width, fig.canvas.height);\n", " }\n", " fig.context.drawImage(fig.imageObj, 0, 0);\n", " };\n", "\n", " this.imageObj.onunload = function() {\n", " fig.ws.close();\n", " }\n", "\n", " this.ws.onmessage = this._make_on_message_function(this);\n", "\n", " this.ondownload = ondownload;\n", "}\n", "\n", "mpl.figure.prototype._init_header = function() {\n", " var titlebar = $(\n", " '');\n", " var titletext = $(\n", " '');\n", " titlebar.append(titletext)\n", " this.root.append(titlebar);\n", " this.header = titletext[0];\n", "}\n", "\n", "\n", "\n", "mpl.figure.prototype._canvas_extra_style = function(canvas_div) {\n", "\n", "}\n", "\n", "\n", "mpl.figure.prototype._root_extra_style = function(canvas_div) {\n", "\n", "}\n", "\n", "mpl.figure.prototype._init_canvas = function() {\n", " var fig = this;\n", "\n", " var canvas_div = $('');\n", "\n", " canvas_div.attr('style', 'position: relative; clear: both; outline: 0');\n", "\n", " function canvas_keyboard_event(event) {\n", " return fig.key_event(event, event['data']);\n", " }\n", "\n", " canvas_div.keydown('key_press', canvas_keyboard_event);\n", " canvas_div.keyup('key_release', canvas_keyboard_event);\n", " this.canvas_div = canvas_div\n", " this._canvas_extra_style(canvas_div)\n", " this.root.append(canvas_div);\n", "\n", " var canvas = $('');\n", " canvas.addClass('mpl-canvas');\n", " canvas.attr('style', \"left: 0; top: 0; z-index: 0; outline: 0\")\n", "\n", " this.canvas = canvas[0];\n", " this.context = canvas[0].getContext(\"2d\");\n", "\n", " var backingStore = this.context.backingStorePixelRatio ||\n", "\tthis.context.webkitBackingStorePixelRatio ||\n", "\tthis.context.mozBackingStorePixelRatio ||\n", "\tthis.context.msBackingStorePixelRatio ||\n", "\tthis.context.oBackingStorePixelRatio ||\n", "\tthis.context.backingStorePixelRatio || 1;\n", "\n", " mpl.ratio = (window.devicePixelRatio || 1) / backingStore;\n", "\n", " var rubberband = $('');\n", " rubberband.attr('style', \"position: absolute; left: 0; top: 0; z-index: 1;\")\n", "\n", " var pass_mouse_events = true;\n", "\n", " canvas_div.resizable({\n", " start: function(event, ui) {\n", " pass_mouse_events = false;\n", " },\n", " resize: function(event, ui) {\n", " fig.request_resize(ui.size.width, ui.size.height);\n", " },\n", " stop: function(event, ui) {\n", " pass_mouse_events = true;\n", " fig.request_resize(ui.size.width, ui.size.height);\n", " },\n", " });\n", "\n", " function mouse_event_fn(event) {\n", " if (pass_mouse_events)\n", " return fig.mouse_event(event, event['data']);\n", " }\n", "\n", " rubberband.mousedown('button_press', mouse_event_fn);\n", " rubberband.mouseup('button_release', mouse_event_fn);\n", " // Throttle sequential mouse events to 1 every 20ms.\n", " rubberband.mousemove('motion_notify', mouse_event_fn);\n", "\n", " rubberband.mouseenter('figure_enter', mouse_event_fn);\n", " rubberband.mouseleave('figure_leave', mouse_event_fn);\n", "\n", " canvas_div.on(\"wheel\", function (event) {\n", " event = event.originalEvent;\n", " event['data'] = 'scroll'\n", " if (event.deltaY < 0) {\n", " event.step = 1;\n", " } else {\n", " event.step = -1;\n", " }\n", " mouse_event_fn(event);\n", " });\n", "\n", " canvas_div.append(canvas);\n", " canvas_div.append(rubberband);\n", "\n", " this.rubberband = rubberband;\n", " this.rubberband_canvas = rubberband[0];\n", " this.rubberband_context = rubberband[0].getContext(\"2d\");\n", " this.rubberband_context.strokeStyle = \"#000000\";\n", "\n", " this._resize_canvas = function(width, height) {\n", " // Keep the size of the canvas, canvas container, and rubber band\n", " // canvas in synch.\n", " canvas_div.css('width', width)\n", " canvas_div.css('height', height)\n", "\n", " canvas.attr('width', width * mpl.ratio);\n", " canvas.attr('height', height * mpl.ratio);\n", " canvas.attr('style', 'width: ' + width + 'px; height: ' + height + 'px;');\n", "\n", " rubberband.attr('width', width);\n", " rubberband.attr('height', height);\n", " }\n", "\n", " // Set the figure to an initial 600x600px, this will subsequently be updated\n", " // upon first draw.\n", " this._resize_canvas(600, 600);\n", "\n", " // Disable right mouse context menu.\n", " $(this.rubberband_canvas).bind(\"contextmenu\",function(e){\n", " return false;\n", " });\n", "\n", " function set_focus () {\n", " canvas.focus();\n", " canvas_div.focus();\n", " }\n", "\n", " window.setTimeout(set_focus, 100);\n", "}\n", "\n", "mpl.figure.prototype._init_toolbar = function() {\n", " var fig = this;\n", "\n", " var nav_element = $('');\n", " nav_element.attr('style', 'width: 100%');\n", " this.root.append(nav_element);\n", "\n", " // Define a callback function for later on.\n", " function toolbar_event(event) {\n", " return fig.toolbar_button_onclick(event['data']);\n", " }\n", " function toolbar_mouse_event(event) {\n", " return fig.toolbar_button_onmouseover(event['data']);\n", " }\n", "\n", " for(var toolbar_ind in mpl.toolbar_items) {\n", " var name = mpl.toolbar_items[toolbar_ind][0];\n", " var tooltip = mpl.toolbar_items[toolbar_ind][1];\n", " var image = mpl.toolbar_items[toolbar_ind][2];\n", " var method_name = mpl.toolbar_items[toolbar_ind][3];\n", "\n", " if (!name) {\n", " // put a spacer in here.\n", " continue;\n", " }\n", " var button = $('');\n", " button.addClass('ui-button ui-widget ui-state-default ui-corner-all ' +\n", " 'ui-button-icon-only');\n", " button.attr('role', 'button');\n", " button.attr('aria-disabled', 'false');\n", " button.click(method_name, toolbar_event);\n", " button.mouseover(tooltip, toolbar_mouse_event);\n", "\n", " var icon_img = $('');\n", " icon_img.addClass('ui-button-icon-primary ui-icon');\n", " icon_img.addClass(image);\n", " icon_img.addClass('ui-corner-all');\n", "\n", " var tooltip_span = $('');\n", " tooltip_span.addClass('ui-button-text');\n", " tooltip_span.html(tooltip);\n", "\n", " button.append(icon_img);\n", " button.append(tooltip_span);\n", "\n", " nav_element.append(button);\n", " }\n", "\n", " var fmt_picker_span = $('');\n", "\n", " var fmt_picker = $('');\n", " fmt_picker.addClass('mpl-toolbar-option ui-widget ui-widget-content');\n", " fmt_picker_span.append(fmt_picker);\n", " nav_element.append(fmt_picker_span);\n", " this.format_dropdown = fmt_picker[0];\n", "\n", " for (var ind in mpl.extensions) {\n", " var fmt = mpl.extensions[ind];\n", " var option = $(\n", " '', {selected: fmt === mpl.default_extension}).html(fmt);\n", " fmt_picker.append(option);\n", " }\n", "\n", " // Add hover states to the ui-buttons\n", " $( \".ui-button\" ).hover(\n", " function() { $(this).addClass(\"ui-state-hover\");},\n", " function() { $(this).removeClass(\"ui-state-hover\");}\n", " );\n", "\n", " var status_bar = $('