A complete CV can be found here.

• Ph.D., Physics Virginia Tech, Blacksburg, Virginia, USA. 2008
  Inhomogeneous Totally Asymmetric Simple Exclusion Processes: Simulations, Theory & Application to Protein Synthesis
  Advisors: Beate Schmittmann & Royce K.P. Zia

• M.S., Physics Virginia Tech, Blacksburg, Virginia, USA. 2005

• B.S., Physics, Shanghai Jiao Tong University, Shanghai, P.R.China. 2003

• B.A., English, Shanghai Jiao Tong University, Shanghai, P.R.China. 2003

1. K. Amarnath, A.V. Narla, S. Pontrelli, J.J. Dong, J. Reddan, B.R. Taylor, T. Caglar, J. Schwartzman, U. Sauer, O.X. Cordero, T. Hwa, Stress-induced metabolic exchanges between complementary bacterial types underly a dynamic mechanism of inter-species stress resistance, Nature Comm. (2023)
   

2. Jiaqi Lin, Hui Sun and J.J. Dong, Emergence of sector and spiral patterns from a two-species mutualistic cross-feeding model PLOS ONE, (2022)
   

3. J.J. Dong, J.D. Russo and K. Sampson, Population dynamics model and analysis for bacteria transformation and conjugation J.Phys.Commun., (2020)
   

4. J.J. Dong and S. Klumpp, Simulation of colony pattern formation under differential adhesion and cell proliferation, Soft Matter, DOI: 10.1039/C7SM02451G (2018)
   

5. J.J. Dong, B. Skinner, N. Breecher, B. Schmittmann and R. K. P. Zia, Spatial structures in a simple model of population dynamics for parasite-host interactions, EPL 111, 48001 (2015)
   

6. M. Sahoo, J.J. Dong, and S. Klumpp, Dynamic blockage in an exclusion process, J. Phys. A: Math & Theo. 48, 015007 (2014)
   

7. A. Körnig, J.J. Dong, M. Bennet, M. Widdrat, J. Andert, F. D. Müller, D. Schüler, S. Klumpp, and D. Faivre, Probing the Mechanical Properties of Magnetosome Chains in Living Magnetotactic Bacteria, Nano Letters 14(8), 4653 (2014)
   

8. L.J. Cook, J.J. Dong, and A. LaFleur, Interplay between finite resources and a local defect in an asymmetric simple exclusion process, Phys. Rev. E 88, 042127 (2013)
   

9. J.J. Dong, S. Klumpp and R.K.P. Zia, Mass transport perspective on an accelerated exclusion process:Analysis of augmented current and unit-velocity phases, Phys. Rev. E 87, 022146 (2013)
   

10. J.J. Dong, S. Klumpp and R.K.P. Zia, Entrainment and unit velocity: Surprises in an accelerated exclusion process, Phys. Rev. Lett. 109, 130602 (2012)
    

11. S. Klumpp, J.J. Dong, T. Hwa, On ribosome load, codon bias and protein abundance, PLOS ONE 7, 11, e48542 (2012)
    

12. R.K.P. Zia, J.J. Dong, B. Schmittmann, Modeling Translation in Protein Synthesis with TASEP: a Tutorial and Recent Developments, J. Stat. Phys. 144, 405 (2011)
    

13. L.J. Cook, J.J. Dong, Power spectra of TASEPs with a localized slow site, J. Stat. Mech.: Theo & Exp. 2010, P10002 (2010)
    

14. J.J. Dong, S.P. Mury, K.E. Drahos, M. Moscovitch, R.K.P. Zia, C.V. Finkielstein, Shorter Exposures to Harder X-Rays Trigger Early Apoptotic Events in Xenopus laevis Embryos, PLOS ONE 10.1371/journal.pone.0008970 (2010)
    

15. J.J. Dong, R.K.P Zia, B. Schmittmann, Understanding the edge effect in TASEP with mean-field theoretic approaches, J. Phys. A: Math & Theo. 42, 1, 015002 (2009)
    

16. J.J. Dong, B. Schmittmann, R.K.P Zia, Inhomogeneous exclusion processes and protein synthesis, Phys.Rev. E 76, 051113:1 (2007)
    

17. J.J. Dong, B. Schmittmann, R.K.P Zia, Towards a model for protein production rates, J. Stat. Phys. 128, 21 (2006)